rs46154171 SNP Detail

Summary

• ID
  rs46154171
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48216276 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGATG ATGTTTACCT TGGCAGGGTC
  G
  TGGAGAGCCT CAGTAGAGCC AGTAT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136451412	ENSMUSSNP3313536	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322953083	CHEV_9_48113059	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46154171					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48216276 () rs orientation: forward

Symbol	Name	Function Class
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Rr195312	regulatory region 195312	1076 bp distal
Rr195313	regulatory region 195313	125 bp proximal
Rr209369	regulatory region 209369	1042 bp distal
Rr383325	regulatory region 383325	within coordinates