rs46155059 SNP Detail

Summary

• ID
  rs46155059
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:5536556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCATTTG GTTTTCTATA
  TGAGCTGGTA CAGAACGCTA GTTACAACAC TGGCTTTACT GTCTTCTCTT AGGTTGGGAA
  AAGCACAGGG ATTCTTCTTT TTCATTTTTC TGTAAAGGAA AGAGGACAAA TAGCTACAAA
  GTATCCTATG CAGATCACAG TGGATATGCA AGACATTCTT AGTAATAACT GATATCCTCA
  Y
  GACTATGAGC CTATCTACTC CTAAGCAAGG TATAGCTTCC TGTGTTTAAG TCTTTCAGAT
  ACTTTATGAT TTTCCTCATA GGCCATCTTG TGATGCCTTA TTTAGTGACT GACATCATAT
  TTTCCTTCCT ATTTCATGAT CCTCTGCCCA GTTTTCTATT CAATCACATT TTCAAACTGG
  TTTTGTTTAA TGTACAAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss145954778	ENSMUSSNP2823301	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs46155059					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:5536556 () rs orientation: forward

Symbol	Name	Function Class
Tssr36375	transcription start site region 36375	265 bp upstream