rs46155227 SNP Detail

Summary

• ID
  rs46155227
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32904046 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCCTAGT TGAGGAGTTA
  TTGGCAGCTG ATGGTGGTGG GAGAGTCAGC TTTCTCTGAG GGTCTGATCA CTGGTAAGCC
  TTTTGTCCCT GATAGGCACT ACACCTATTT GAATCAGTAA GTTATTTAAA AAAAAAAAAA
  AGGGAGGGGT GTGGGTAAGG AGCCAATCTG GAAGGAATTA AGCGGGAGAG TAGGAGGCAA
  R
  TCTGATCAAA ACACATTTTA TGCATAAAAT TCTCAACAAC AAATTAATAA AATATTGTGT
  ATTTAAAAAA AAAAAAAGGT ACATGCTGTG AGTGCAGTCC AGTGCAGAGG ACTTTGGGAG
  ATGGTCTGTG ACCAAGCCTG GCCTGGTTGC ATTCTCCTAG CAGGAGAATT CCTGTTAATG
  ATTTTGCTAG ATACACTGTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss145473629	ENSMUSSNP1028603	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325362845	CHEV_17_32822017	CHEVERUD	SCREENING_POP	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs46155227					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32904046 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	559 bp upstream
Rr339615	regulatory region 339615	554 bp proximal
Tssr143733	transcription start site region 143733	513 bp upstream
Tssr143734	transcription start site region 143734	538 bp upstream
Tssr143735	transcription start site region 143735	567 bp upstream
Tssr143736	transcription start site region 143736	583 bp upstream
Tssr143737	transcription start site region 143737	1021 bp upstream