rs46159777 SNP Detail

Summary

• ID
  rs46159777
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118690013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCCTCTGT TTTTACAAAG
  CCTCTTTGGT ATCATTCATT TCATTTTCTT CAGCATCAGC TGGGGATAAT TATAGCTCAG
  AGGAGTGCGT AAGGATGAAG GATGCTCCTG TGACACTGTG GGATCTGCAG GGAGCTTTCT
  CCCCTTTGTG GGGAGAGCTG CTCCTACATG CTGCCAAACG CAATACAATC ACACCTCTTC
  S
  AGTCCTTACC ACAGCCAGCT AACACTTCAG AAGAACCACC ACTCATTCTT GATTTACTAA
  ACTTCCGAGA CTCAGAAAAA TCGGCCATTC CCGTCTCCCT CGCAGTTAAT GAGGATGCAA
  CCACGGCCGA TCCGTTAAGT CGAAGAGGAA AGCAAATAAA CCAAGCACTT GGCATGAAGA
  CGCGATTCTC TCATGCACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
ss61322042	NES16929494	PERLEGEN	MM_PANEL2	f	SNP	C	G		C	C	C
ss323503914	CHEV_10_118291164	CHEVERUD	SCREENING_POP	f	SNP			G				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J
rs46159777					SNP	C	G	G	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322042	NES16929494	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118690013 () rs orientation: forward

Symbol	Name	Function Class
Dyrk2	dual-specificity tyrosine phosphorylation regulated kinase 2	1495 bp downstream
Gm67702	predicted gene, 67702	within coordinates
Rr226050	regulatory region 226050	1213 bp distal
Rr226051	regulatory region 226051	within coordinates
Tssr99504	transcription start site region 99504	1756 bp downstream