rs46160723 SNP Detail

Summary

• ID
  rs46160723
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:113396132 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCTGTCT GTCTGTCTGT
  CTGTCTGTCT GTCTATCTGT CTATCTAATC TATCCATTCA TTTGTTCACT TAACATCATT
  CCAGTTACAG CTGTCTCCTT TCTCTCCTCC CAGTCCCAGC CTCACAAGTC CCTCCAACCA
  TTACCCTTTG CCCATCTCCT CAGAGATGGG GAGCCCCCCT GGGGTATCAT TCTGCCTAGG
  R
  ACATCAAGTC ACAGCAGGAC TAAGCACATC CTTTCCTACT AAGGCCAAAC AAGGCAGCCC
  AAGCAGGGGA AGGGGATCCA ATGGCAGGCA ACAGAGTCAG AGACAGCTCC TGCTCCAAAT
  GTTAGGGTAA TACACACATG AAGACCAAGC TGCACATCTG TTACACATGT GTAGGAAGTC
  TAGGTCCAGC CCCCTACATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss138742516	ENSMUSSNP2716944	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46160723					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:113396132 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighd4-1	immunoglobulin heavy diversity 4-1	1974 bp upstream
Ighg	Immunoglobulin heavy chain (gamma polypeptide)	within coordinates
Tssr118021	transcription start site region 118021	1909 bp upstream
Tssr118022	transcription start site region 118022	1880 bp upstream
Tssr118023	transcription start site region 118023	1717 bp upstream