rs46164331 SNP Detail

Summary

• ID
  rs46164331
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:144148934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGACACCTGA ACTCACATGG TGGAAGAACA TAAAGAATTG
  GTTCCCATTG GTCCTCTGAC CTCCAAACTC ACACATGGCA TGCATAGGCA GACATCCACA
  T
  ATATACCTTA TGTGCGCTAA ATAAATGTTG AGCGGGAACA TACTGGGGGG TGGGGGGAGA
  GGCACAAGGT GGTGTCAAGA GGACACTTGG CATCATTGG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147790724	ENSMUSSNP7129464	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46164331					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144148934 () rs orientation: forward

Symbol	Name	Function Class
Ovol2	ovo like zinc finger 2	Intron
Rr566440	regulatory region 566440	916 bp distal
Rr566441	regulatory region 566441	1224 bp proximal