rs46164382 SNP Detail

Summary

• ID
  rs46164382
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33021919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATCCGCCT GCCTCTGCCT
  CCCAAGTGCT GGGATTAAAG GCATGCGCCA CCACTCCCCA GTGAGGATAT GTTTTTAAAA
  CAAAGTTTTT AAAGACAAAG CGGAGGTGGG GGGTGTGAGA TTATGAACTA GTTTTATCCA
  GAGGTAAGAC ATTGTTTCAG TGTGAAAAAG GAAAAGATAA GTGAGACAGG ACAAAAGGTA
  K
  GAAGAATTAG AGAGAGATGT TACAGAAAAC AGGAAGAAAA AAAAAGAAAG GAAAAGAAAA
  CAGGTTCTGG ATTCCCCCAA CCCCCACTTC AGGTTTGGTT TTCCTTTTGA AAGGGCCAGG
  AAACTTCAGC AACCACTAAG AAGGCAAACA GAGACACAGT ATGTTTCCTA TGGCATCTAG
  TCAAAGAAAA TAAATACCCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss62681162	NES17310247	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	T	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs46164382					SNP	T	T	T	G	T	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62681162	NES17310247	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33021919 () rs orientation: forward

Symbol	Name	Function Class
Gm55909	predicted gene, 55909	1922 bp downstream
Zfp811	zinc finger protein 811	within coordinates