rs46166389 SNP Detail

Summary

• ID
  rs46166389
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191225190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG GCTAGCCTGG GAGAACATGA
  R
  GCTGGAAACA GATTCTGGGT GTAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146507144	ENSMUSSNP2989367	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46166389					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191225190 () rs orientation: forward

Symbol	Name	Function Class
D1Mit209	DNA segment, Chr 1, Massachusetts Institute of Technology 209	110 bp proximal
Gm37432	predicted gene, 37432	within coordinates
Rr426168	regulatory region 426168	460 bp proximal
Rr426169	regulatory region 426169	1487 bp proximal
Rr426170	regulatory region 426170	1946 bp proximal