rs46172620 SNP Detail

Summary

• ID
  rs46172620
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:32862670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCAGCTAAG CATGGTGGCA
  TATACAATCT CAGCAGGTGG ATCTCTGAGT TCCAGGCCAG CTTAGTAAAT TCTACATAGT
  GAATTCTACA TAGTGAACTC CAGGACAGCT AGGGCTACAC AGCGAGACTC TGTCTCAAAA
  CAACCCCACA CCCTCACAAG ACCTCAAGTG GATTCCACCA ACAGCTAACA GTGTGGTGAG
  R
  GCTGTTTGAT AGGATGGTGA GAGTCACAAT GTTTCTTAAG GGAAAAATAG TCTAATCTTA
  TGGATCAGTA CAGCCAAGCC AAGCCTGCTG CATTCAATGA CTGACAGTGG AGAGTGGGCC
  TCGGGGCAGC CTTGTGATGG AGCCACAGTG TCACTTGGGT AACTTTACCT CTGGAAAGGG
  GCAGCTTTTC TGTGCAAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146405034	ENSMUSSNP6813901	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46172620					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:32862670 () rs orientation: forward

Symbol	Name	Function Class
Rr555133	regulatory region 555133	1093 bp distal
Slc2a8	solute carrier family 2, (facilitated glucose transporter), member 8	332 bp downstream