rs46176479 SNP Detail

Summary

• ID
  rs46176479
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:38353073 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGTTCAT AGGATGGGAT
  GGAATTCACC CAGAAAAAGA AGCAATGTTC TCACAACCTG AGCCCAGTCA CCAGAATCCA
  TATAAAAATA AGGAGACAAT AAGCCCCGCA GATTTGTCCC TGACATCAGC ATACCTGTCA
  TCTATTCCTT TCCCAGAGCT CACTAGGTCA TCTAGATGGA GGAGGGGTCT GACATTCTCT
  S
  CCTCCGGAGC ACTTGGATTA CAGAGGTGAA CCACTACACT ATGTCTTTAT GTGGGCACTG
  GAGATCCAAA CTTGGGTCCT TATTCTGTGG GCCAAGGGCT TTAACAACTG AGCCATTTCC
  CCAGCCCCAA ACATTTGTTT TGACGAATAT TCATAAATCT AGTGATCAAA ATGAAAAAGC
  TAAGAACACT TAAATTGATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss133127187	ENSMUSSNP6858332	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46176479					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:38353073 () rs orientation: forward

Symbol	Name	Function Class
D0Nds34	DNA segment, Nuffield Department of Surgery 34	983 bp proximal
Rpl30-ps1	ribosomal protein L30, pseudogene 1	669 bp upstream
Tssr55644	transcription start site region 55644	596 bp upstream