rs46177191 SNP Detail

Summary

• ID
  rs46177191
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:38355028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATATACTC GTACTGGCTT
  TAACTGGATA CTGCAATGGT TTTGGGCAAC GTTATCACAG CTCCTTAGAG ACTACAGTTT
  TCTCCCAACC ATAATAAAGC TGCAAGCCCT AACTTTGTCT TTCACCCCAG TAAAAGCTTT
  CCTGTGCTGA TGTTGTCACG TTTTATAACA CCAGGTGGGC TCCTTAGAGC TGTTGTTGTT
  W
  AAAATAACTT CTCCAGTACA TTTAGGGCCA TCTTCTGTCC ATTATAATTA CAACATGTCT
  CAAACAGCCT CTGCAAGGAT GCAGAGACTT AAAGGAATAC CACAACCTTT AGGAAATCAG
  GGATCATTTC AGCTGATTTA GTAAATTCAA CAGGGTGGCA TAGAGTGCTA TCAGTAACAC
  GGACTTTAGA CCATAGTAAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss133127202	ENSMUSSNP1134412	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs46177191					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:38355028 () rs orientation: forward

Symbol	Name	Function Class
D0Nds34	DNA segment, Nuffield Department of Surgery 34	818 bp distal
Rpl30-ps1	ribosomal protein L30, pseudogene 1	939 bp downstream
Rr135132	regulatory region 135132	973 bp proximal
Rr146156	regulatory region 146156	1027 bp distal
Tssr55644	transcription start site region 55644	1355 bp downstream