rs46178470 SNP Detail

Summary

• ID
  rs46178470
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52655070 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTTTTGG TATCTAACTC
  TATAAACTAA AGCATGCTAT ATTACCACTT CCCAAACTTG CCTGGTGATA GATCCCCGAC
  TCAATTTCTG ACAGCCTCTA GAGGTTTGAT CTATTCTAGT CATCCAACGA GTGATATAGA
  ACATCTCCCC AATGATCTGT GCTTCTTAAA AGATACTTGT AGGGTCCAGA GGGATAGCCG
  G
  CCAGTTGAGA GCACCTGCCG TCCTCGCAGA GGACCTGAGT CCAACTCTCA GTATGTGGCT
  ACACATAGTG TGAATATATA CATTTTTTTT TAAAGTCGTC TTTAAATGCC TTGACTTGTG
  GCTTTCTTTT AACTCTGTTA GTATTAAAAC TCCATATGAC CATTTTTGAA CACAAGAATT
  GAGGTGAACC TGAATCTATG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137738414	ENSMUSSNP3598060	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46178470					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52655070 () rs orientation: forward

Symbol	Name	Function Class
Gm35239	predicted gene, 35239	within coordinates
Tssr113445	transcription start site region 113445	644 bp downstream