TCTCACCTTA GCTTGCCCCA GGACTGCCTG GCCACTGGAA ACCCCTTACA TATTTGTTAA CAGAGACGCT AAATAGGATA AATTCAGAGC TACTCCAGAG CTACTCTCGC CTTCTGAACT GGCAGATACT GAGAAAAACT TTGTTAATGG TAAGATCGAG CAAGTCCGCA AGCACTGTAC ATTTTCAGAG AAGACAGATA S TACCCCCTCA AAGTATTAAG TAACCACACA TTATTTGTTG TGGGTGGGAG GAGGCCACCA GCATAGAGTG TAAAAAGCAA TAAGTCTCTG TATTTGTTTC TTCTCTACAA TTTCAATTGC ATGAAAAATG GACTGAACAT GACCATCTAC ACTGTATTCC AAAGAACAGA GAATTCATTT AAACTGGATT CACTTCTAGG S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
MSM/Ms |
---|---|---|---|---|---|---|---|---|
ss147626644 | ENSMUSSNP4523628 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | C |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
MSM/Ms |
||||
rs46183638 | SNP | G | G | C |
Location: Chr2:133391997 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi12316 | CpG island 12316 | 1777 bp proximal | ||||||
Rr366783 | regulatory region 366783 | 171 bp upstream | ||||||
Rr565619 | regulatory region 565619 | 121 bp proximal | ||||||
Rr565620 | regulatory region 565620 | 222 bp proximal | ||||||
Rr565621 | regulatory region 565621 | 1796 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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