rs46188923 SNP Detail

Summary

• ID
  rs46188923
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11346639 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      C TGGAGCTATC TTTGACTCTG TTGCCTGCCT TTGAGATCCG
  TTTCTCCTAC TGGGTTGCCT AGTCTAGCCT TAATAAGAGA GGATGTGCCT AGTCTTACTG
  M
  AACTTGACAT GCCATGGCTG GTTGATATCC ACAGGAGGCC TGCTCTTTTC TGAAGAGAAA
  TGGAGGAGCA GTGGATTGGG GAAGAGGAAG GGGGAGGAAC T                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135229082	ENSMUSSNP2881671	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46188923					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11346639 () rs orientation: reverse

Symbol	Name	Function Class
Ms4ac	membrane-spanning 4-domains, subfamily A cluster	within coordinates
Rr544325	regulatory region 544325	1967 bp proximal