rs46189439 SNP Detail

Summary

• ID
  rs46189439
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148526971 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAAAGAAGC TCATGAGCCC AAAGGGCCTA TAGAGTCCGC
  AAGCCTTCCC ACTGATGCCC GGACACTACT TCCTCTCTTC CTTTACCCCC TGGATGACTC
  T
  CCCCCCCCCC CCCCCGTGCA CACAATGAAT TTCTTTCTAT CACACAGGCA CTTTGGCCCT
  TGCTGTTCCT GTCCCCTGGA GTTCTATTCC CAGACATCC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148007620	ENSMUSSNP1709490	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46189439					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148526971 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15303	CpG island 15303	1664 bp proximal
Gm23303	predicted gene, 23303	838 bp downstream
Tssr44605	transcription start site region 44605	1941 bp downstream
Ubiad1	UbiA prenyltransferase domain containing 1	within coordinates