rs46191638 SNP Detail

Summary

• ID
  rs46191638
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111861225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAGGATAA CAATAAGTGC
  CTACTACTGC ACTAGATTTT TGTTGAGATA AGTTTTTTTT TCTTAACTAC TGCAAAGTAC
  TCACAATGTC TGGCATGTAA CGAATGCTTT AATATATAAT CTATCACTTT TATTATCTAA
  TATACCGGTA CCATTTAAGA AACAAAAATA CCCTAAGTTT ATCTCTTCAA ATTTCCAATT
  R
  TCAGTTATAG ACCTCTTTTT AGTCTATCTC ATTAGCTTCT GTAAAGGAAT TTTAATCCAG
  CAACATGACT GCTCTGATCA CATCCAAAGC CTTCTAGGTC TGTATGATTT GGCTGAAATG
  CAGACACATC AGTACCACAC AAATTTAATC CCCCTGGTTG TAATCCTTTA ACACACACTG
  TTGATCCCAA ACAATAATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134277791	ENSMUSSNP777996	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss325913366	CHEV_X_110065137	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46191638					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:111861225 () rs orientation: forward

Symbol	Name	Function Class
Rr2637	regulatory region 2637	1225 bp distal
Rr6449	regulatory region 6449	1473 bp distal