rs46196005 SNP Detail

Summary

• ID
  rs46196005
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67384438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGAAGGAC TGACATTCAA
  CCCCAAGTAT AGACATTTAA ACTGACCTTC AAATGACCTG TCTTAGCGTT CTGTTGCTGT
  GAACAGCCAT GGCAGCTCCT ATACGAGAAG GCATTTAATT GGGGCTGGCT TATCGTTTCA
  GAGGTTTGAT TCGTTATCAT GATGGGAGCA TGGCAGCACA TAGGCACACA AGATACTAGA
  R
  AAGTAACAGA GTTCTGCATC TGCATCTGCA GACAGCAGGA AGAGAGAGAC TCTGGGCCCG
  GCTTTGGCCT TTGAAACCTT AAAGCCCCTC CCCCAGGGAC ATACTTCCTC TAGCTAGGCC
  ACACTTCCTA ATCCTTTCAA ATACTTACAC TCCCTGGTGA CCAGGCGTTC AAATCTGTGA
  GCCTATAGGG GCTGTTCTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135257883	ENSMUSSNP131168	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs46196005					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67384438 () rs orientation: forward

Symbol	Name	Function Class
Gm42568	predicted gene 42568	within coordinates
Rarres1	retinoic acid receptor responder (tazarotene induced) 1	1867 bp downstream