rs46196321 SNP Detail

Summary

• ID
  rs46196321
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:33959891 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTGTTGAA GGGAGTCTAG
  GAAGATGGTG TGTTTCCCAC TGAGCACGAA AGCAAGCACA AGCGACACCC AGACTGACAG
  CAGCCCCAGC CATCAGCTCC CAAATACCTG AGGAACTGAG GTCTGCTCCC GCCTGAAGTA
  AGGCGGCCGT GTCTTGGGAG CAATCAGGAA CACGTGTTCT TGCAGGACCT GGATTTAATT
  Y
  TCTGCACCCA CATGGCAGCT CACAGCCATT CCTAACTCCA GTTCTAGGGA ATCTAATGCC
  CTCTTTGAAC CTCTTCTGGT GTTTGACTGT TTACACTCAA TTCAACACTC AAACACATAA
  AATAAATATA AAAATAAATT TTAAAAATTG CATGTCCATA TTAAAGAGGG CCTCATACTT
  ACTGCTTTAC AGTTTTAATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss139267674	ENSMUSSNP2283603	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46196321					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:33959891 () rs orientation: forward

Symbol	Name	Function Class
Shld2	shieldin complex subunit 2	within coordinates