rs46196782 SNP Detail

Summary

• ID
  rs46196782
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144103586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAATC CGTGGTTTTC ACACTTACAG
  C
  CTCATTCATA GCATTAGTAA ACGGC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss136030741	ENSMUSSNP4950725	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs46196782					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144103586 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13898	CpG island 13898	1034 bp distal
Gm65349	predicted gene, 65349	1086 bp upstream
Rr586643	regulatory region 586643	1107 bp distal
Rr586644	regulatory region 586644	937 bp distal
Rr586645	regulatory region 586645	1485 bp proximal