rs46202674 SNP Detail

Summary

• ID
  rs46202674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180123528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGAGACAGG TGGGTTTCTC CTTTTGTCTT GATTGCTCTT
  AGGAATCAAG AAGAGAATAA ATTCAGGAAG ATGTACCACA CAGTTTGTAC CTCTCAAATA
  R
  CTCCCCTCTA GTTGGATTTT GACCAGGATC ATGATAAATG CCCAGAACAC ACATTGCCAT
  GATTCTGTTT TGGGGGAAGC ATCAGGTCCC TGGTTGAAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148392704	ENSMUSSNP4076018	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320632274	CHEV_2_180216440	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46202674					SNP	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180123528 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12896	CpG island 12896	734 bp proximal