rs46205284 SNP Detail

Summary

• ID
  rs46205284
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135638112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATG GTTACATATG CCTGTGACCT
  T
  AGCACTGGGG AGCAGAGACA AGCAG                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145543523	ENSMUSSNP1918517	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss319992558	CHEV_1_137606951	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46205284					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135638112 () rs orientation: forward

Symbol	Name	Function Class
Gm57161	predicted gene, 57161	within coordinates
Rr419241	regulatory region 419241	1690 bp distal
Rr419242	regulatory region 419242	768 bp proximal
Tssr8966	transcription start site region 8966	998 bp upstream