rs46211141 SNP Detail

Summary

• ID
  rs46211141
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70118413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGATTG AGTAAACCTG
  ACTTGGCCAT TGCCTTTGAA AATGTCTGAG CTATATTCCT TTTTCTTTAC TGTGTATTAT
  TCTTGAGTTG CTAGCAGGTA TAGTACCCAC ACACACAAGA CCGATTCATT CATTCATTCA
  TTCATTCATT TGAGACGGTG TTTCTCTGTG CAGCACTGGC TGTCCTGGAA CCCACTTTGT
  M
  GATCAGGCTG GCCGTGAATC CAAAGATTTA CCTGCCCTGC CTCCCAAGTT CTGGGATCAA
  AGGCGTGCAC CACCACATCT GGCTACAGAA CCGATTTATA ACTTAGAGAT CTGGTAGACA
  GTCGATCAAG GGGAAGATAG GTTCCTTCGG GTGGGGACTG GTATGTATTT AGTAAGTCTG
  GAATGCATTT GGAATGTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136604711	ENSMUSSNP5116489	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46211141					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70118413 () rs orientation: forward

Symbol	Name	Function Class
Gm26849	predicted gene, 26849	within coordinates
Gm68934	predicted gene, 68934	197 bp downstream
Myo1e	myosin IE	within coordinates
Rr206677	regulatory region 206677	1612 bp distal
Rr206678	regulatory region 206678	1212 bp distal
Tssr90403	transcription start site region 90403	590 bp downstream