rs46212514 SNP Detail

Summary

• ID
  rs46212514
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127820821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGTGGGAT GGGGTGGGGT
  GGGGTGGGGT TTGTTTTCTT CATCTTCCAA TTACTTTACA CAGGTTGCAA AGCACGTTTG
  TTCTAGTAGG TCATAGCTTC CTGCTCTGTG GCTCTGGATA GCAAGAAACT GCTACAATTT
  GAGCAGCACT CTGGGATAAA GAGTAAGGTG TCCAACCTCT CGAAGGCCTT TACCCCTCCC
  A
  CGGGGGCCCA TCTGCCTGCT CTAGGGATTA ATGTAGTCGT CCTCTACCCT AGCTGTGTAA
  CAGAATTACC CAGGACATTT ACAAAATTGG TTTGGCTTGG CTGTAGGAAT AGTAATTAGC
  CAATGTTGAG GAAACTCCAA GGTAAAGGAC TCAGTTTGCC TTCAGAAACC TCCTAGGCTC
  TGCCAGCCTG GATCTCCCTC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss145887744	ENSMUSSNP1660113	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs46212514					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127820821 () rs orientation: forward

Symbol	Name	Function Class
Gm44850	predicted gene 44850	861 bp upstream
Itgad	integrin, alpha D	within coordinates
Tssr75086	transcription start site region 75086	770 bp upstream
Tssr75087	transcription start site region 75087	735 bp upstream