rs46216301 SNP Detail

Summary

• ID
  rs46216301
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48032987 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACATGCGT AGAGAGCAGA AGACAATCTG TGGGACAATC
  GGTTCTCTGG TTCTCTTCTT CCACCAAGCG GGACTAAAGG GATGAAACTC AGGTCTTTAA
  S
  ATTAACAGCT CATGCTTTCA TCCCAGTATT CAGAATTAAA ACAAAACAAA AAACCCCAAA
  ATGTTATTAA AGGTCTTGGC AGCGAGGAAG ATGGCTGAA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145708768	ENSMUSSNP5527535	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
ss325406494	CHEV_17_47859011	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46216301					SNP	C	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48032987 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	526 bp proximal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	513 bp proximal