rs46217751 SNP Detail

Summary

• ID
  rs46217751
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:93455506 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGATC TCTGATGCAT TCTGAAGGCT
  Y
  CCCCCAACCT CCTATCTCCC TATGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148847121	ENSMUSSNP2656766	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss321615113	CHEV_5_93736673	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46217751					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:93455506 () rs orientation: forward

Symbol	Name	Function Class
Gm72287	predicted gene, 72287	1153 bp upstream
Tssr51943	transcription start site region 51943	1215 bp upstream
Tssr51944	transcription start site region 51944	1200 bp upstream
Tssr51945	transcription start site region 51945	1189 bp upstream