rs46218304 SNP Detail

Summary

• ID
  rs46218304
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:53934994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CTTATCTTTG GCTAAATACT AATTGTGAGG TCAGCCTGGA
  CTATGTGAAA CCTTATCTCA AAAATCAATC ATCAATCAAT CAATCAATCA AACTTGGATT
  Y
  CTGTTATATA ACAATGAGGA AATTTTAGAA TGCAGGAAAC ACACATAGAT ACTCTAGTGT
  ACTCGGTGTC CCCAAGGATT TGTGAAATAC TTCAGAATGG A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss147113958	ENSMUSSNP3490007	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46218304					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:53934994 () rs orientation: forward

Symbol	Name	Function Class
Man1a	mannosidase 1, alpha	within coordinates
Rr215194	regulatory region 215194	607 bp proximal
Rr222944	regulatory region 222944	1559 bp distal
Rr227916	regulatory region 227916	within coordinates