rs46226454 SNP Detail

Summary

• ID
  rs46226454
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:76041574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGCTGAGG AATGTTCAAG
  TCCCATCTTG CAGGTGCTTT TCCACATGAT AAAGCTTTTA TTCTGAGTGA ATAAGAACAA
  GAAACCCTGT CCTTTGAGGA GATGTCCACG GAGACGAGCC ACTGGCTGAA CGTCGTACAC
  ACCTTTCATC CCAACACTCC AGATGCAGAG GCAGGCAGAT CTCTATGAGT TTGAAGTCAG
  Y
  CTAGTCTACA TAGTGAGTTC CAGGACACCA GAGCTATACA GCGAGGTAGA CCCTGTCTTA
  AAACAAAACA TCTAGCAATT GGCTCACACT CCAATGAGGC TCTATCTTAA ATAAGACGCA
  TCTTAAATTT GGTGTTCTCT CAGTCACGTT GGGTCCCTTT TATCCCAGGA GTTGGGGACC
  CTCAGGACAC CCTGCTGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss148164916	ENSMUSSNP6549465	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs46226454					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:76041574 () rs orientation: forward

Symbol	Name	Function Class
Gm62598	predicted gene, 62598	1294 bp upstream
Rr390932	regulatory region 390932	355 bp upstream