rs46227805 SNP Detail

Summary

• ID
  rs46227805
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97239896 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAAGATGC TTAGCATGTA
  AACGTGATCA CTGAATTTGG TAACCTGATT TTAGCCCCTG GAACCCTGTC TTAGTTAGGG
  TTTTACTGCT GTGAACAGAC ACCATGACCA AGACAAGTCT TATAAAGGAC ATTTTTCATT
  AGGGCTGGCT TACAGGTTCA GAGGTTCAAT CCGTTATCAT CAAGGTGGGA GCATGGCAGC
  R
  TCCAGGCAGA GCTGAGAGTT CTACATCTTC ATCTGAAGGC TGCTAGCAGA ACACTGACTT
  CCAAGTAGCT AGAGTGAGGG TCTTAAGGCC ACACCCACAG TGACACACCT ACTCCAACAG
  GGCCACCCCT TCTAATAGTG GCACACTCCC TGGCCCAAAC ATATACAAAC CATCACAGAC
  CCACAAGGTA GAAAAAAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148436571	ENSMUSSNP3120265	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss325076702	CHEV_15_97172446	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46227805					SNP	A	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97239896 () rs orientation: forward

Symbol	Name	Function Class
Gm33325	predicted gene, 33325	within coordinates
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr404591	regulatory region 404591	388 bp upstream
Rr508793	regulatory region 508793	341 bp proximal
Rr508794	regulatory region 508794	1036 bp proximal