rs46238635 SNP Detail

Summary

• ID
  rs46238635
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:84564145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGCTGTC TTTCCCAGGG
  TTGCTGCTGC ACCAACTCCG TAGTTTGTCC TTGTCAGCAT CTGTCTTCAG ACCGGCTGCC
  CTCAGGTGGA TACCAGGTTT TTTTGTTTGG TTGGTTTATT TGTTTTTGTT TTTTCAAGAC
  AGGGTTTCTC TGTACAGCCC TGGCTGTCCT GGAACTCACT TTGTAGACCA GGCTGGCCTC
  R
  AACTCAGAAA TCCGCCTGTC TCTGCCTCCC AAGTGCTGGG ATTAAAGGCG TGGGCCACCA
  CCACTCGGCT GGATTCTAGC CTTAGAGTCA GTGTAATGTT CTGGGGCTCG TGGTGGCCCG
  GAAATACAAG ATCACAGGTA CTCAGTAGGA CAAGCCAGAG TCTGTGAGAA TTCTTACAAA
  GTTTTGTCCA CACCTGTCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135427385	ENSMUSSNP4150487	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46238635					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84564145 () rs orientation: forward

Symbol	Name	Function Class
Gm37240	predicted gene, 37240	within coordinates
Rr68541	regulatory region 68541	745 bp distal
Rr68542	regulatory region 68542	1256 bp proximal