rs46241793 SNP Detail

Summary

• ID
  rs46241793
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148528179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAAA GGCTAAGCCA TGTCTCCATC
  R
  GGGGAGCAGT GTTCATAATC CACTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321420463	CHEV_4_147817831	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46241793					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148528179 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15303	CpG island 15303	456 bp proximal
Gm23303	predicted gene, 23303	237 bp upstream
Rr604684	regulatory region 604684	1013 bp proximal
Rr604685	regulatory region 604685	1039 bp proximal
Tssr44605	transcription start site region 44605	733 bp downstream
Tssr44606	transcription start site region 44606	1011 bp downstream
Tssr44607	transcription start site region 44607	1022 bp downstream
Ubiad1	UbiA prenyltransferase domain containing 1	within coordinates