rs46243703 SNP Detail

Summary

• ID
  rs46243703
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87153186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAG AAGCCCATTA CAGGGGGTTC
  S
  ACAGACTTCC AACTCCACCA GCAAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135456655	ENSMUSSNP5584361	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320831790	CHEV_3_87049801	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46243703					SNP	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87153186 () rs orientation: forward

Symbol	Name	Function Class
Rr579462	regulatory region 579462	1799 bp distal
Rr579464	regulatory region 579464	1055 bp distal
Rr579465	regulatory region 579465	1519 bp proximal