rs46245472 SNP Detail

Summary

• ID
  rs46245472
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:20988472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAG TGCACAGACT GCCCTCGAGA
  T
  GACACGAGTG TAGCCAGCTT TGAGC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148726403	ENSMUSSNP4213848	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46245472					SNP	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:20988472 () rs orientation: forward

Symbol	Name	Function Class
Paqr8	progestin and adipoQ receptor family member VIII	within coordinates
Rr407023	regulatory region 407023	1710 bp proximal
Tssr6058	transcription start site region 6058	394 bp downstream
Tssr6059	transcription start site region 6059	389 bp downstream