rs46245535 SNP Detail

Summary

• ID
  rs46245535
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:173151202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAACC ACCTAACACT AGCATATTAC
  A
  TCACTTCTCA TAGAACCGAA CTGAC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146220156	ENSMUSSNP3635915	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320131688	CHEV_1_175253766	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46245535					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:173151202 () rs orientation: forward

Symbol	Name	Function Class
Rr423668	regulatory region 423668	1543 bp distal
Rr423669	regulatory region 423669	271 bp proximal
Rr423670	regulatory region 423670	350 bp proximal
Rr423671	regulatory region 423671	1824 bp proximal