rs46251814 SNP Detail

Summary

• ID
  rs46251814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:9128401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCCTGGGT CCTCTACCTG
  AGTCAAGTTG GAGGCAGAAA GAAAAATGCA CTGTCCATTA TTAATGTCAT TCTTCCTGGA
  AAACTAAGAT ATTCGAGATA TTTGGATGCC ATCTGTTCAG AAGTTCCCTT CCCTTTCTTT
  ATATTTGCAC CATAAAAGGG TGTTAATGAA ATGCATGGCC TGCTTTCAGG ATTGATGACC
  Y
  AGTCGTTGCC ACAATTCTCT CTTCCTTTTG ATTCATGAGC TCTTCATTTC CTGGGCCTAA
  TGAATTCTTA CAATGTTGGT GCCGGATTGG GAATACTGCA GAGGTGAAGG TATTTTTAAG
  GAGTAAAGAA TGAGCCTGAG TGTGCATACT AAGGGCTATT GACCCCGAGC CTGCAAGGCA
  AGGATTGAAT GTAGAGTAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss52139251	NES15246727	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs46251814					SNP	T	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52139251	NES15246727	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:9128401 () rs orientation: forward

Symbol	Name	Function Class
Gm67478	predicted gene, 67478	within coordinates
Rr220895	regulatory region 220895	within coordinates
Rr384122	regulatory region 384122	within coordinates