rs46253107 SNP Detail

Summary

• ID
  rs46253107
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52028136 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTCTGCC TCCCCAGTGC
  TGGGATTCAA GGCATGCACC ACCACCTCCC AATGTGTTTT GTTTTCTTCT TGGCAGGCAA
  TCCAGCTGGG CTGAAAAAGG ATCTCGAAGA AGCTTGAATT TTCATTTCCC TGATAGCTGA
  GACTGTCAAA CCCTTTGGCA GAGTTAACCA GCCATTTGTT TCTTCTTTTG AGAACTATCT
  K
  TTCAGTTCAT TGTTCCATTC ACTGAGTGAA GATTCATTTT CTTAGTATTT GGAATAAATG
  ATCTTAAATG TTCACTAAGA AGCCTGTGGA CTTCAGTGGA ACCTGTCCTA GAACTCACTC
  TGTACACCAG GCTGGCCTCA AACTCAAAAA TCTGCCTGTC TCTGCCTCAT GTGCCCACCA
  TGCCCAGCAT ACACTTTATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss137728880	ENSMUSSNP1717735	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46253107					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52028136 () rs orientation: forward

Symbol	Name	Function Class
Gm60186	predicted gene, 60186	within coordinates
Rr387210	regulatory region 387210	993 bp downstream
Rr387211	regulatory region 387211	1940 bp upstream