rs46266970 SNP Detail

Summary

• ID
  rs46266970
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:80817988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAG TTACCACAAC CACAAGGCAT
  W
  TACCAGCTTG TGTCAACAAA GAATA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135386090	ENSMUSSNP6777867	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
ss320812941	CHEV_3_80714603	CHEVERUD	SCREENING_POP	f	SNP			A	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46266970					SNP	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:80817988 () rs orientation: forward

Symbol	Name	Function Class
Glrb	glycine receptor, beta subunit	Intron
Gm54207	predicted gene, 54207	1857 bp upstream