rs46272081 SNP Detail

Summary

• ID
  rs46272081
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:39296680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATATTGAG AGATATTAAA
  GGCAGATGAT TGTTAGTTCC TGTTATGTTT ATTGTTGTAG GTGGCATCAT CTGCATGTGA
  TTCTCTCATT TTGGTTTTGT TATGAGATGA TTAATACCTT GTTTTTTATT TGGTGTATAT
  ACTATTATAT GTATTGTGGC ACATAATTAA TTCCAAGCTC TAGGGAGGTA AAGACAGGTG
  R
  ACATCTGGTA GAGGCAGGTG GATATCTGTG AGTTCCAATT TGGTCTTTGA GTTCTTGCAG
  ATGCAGGGCT ATGTAGAGAG AGCCTAACCC CAAAACAAAA CAAAAACCGA AGAGGAAATA
  GACACATACA TACAAACATA CATACATACA GAGAGAGAGA GAGAGAGAGG GAGAGAGAGA
  GAGAGAGAGT GAGAGAGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147663769	ENSMUSSNP720314	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46272081					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39296680 () rs orientation: forward

Symbol	Name	Function Class
Rims2	regulating synaptic membrane exocytosis 2	within coordinates
Tssr131153	transcription start site region 131153	1013 bp upstream
Tssr131154	transcription start site region 131154	1039 bp upstream
Tssr131155	transcription start site region 131155	1067 bp upstream
Tssr131156	transcription start site region 131156	1283 bp upstream