rs46277648 SNP Detail

Summary

• ID
  rs46277648
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24503020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGAAAATC ATGGTATTTG
  TTCCAAAGAT ATCTAGTAAA AACATGGAAA AATACATGAG CTAAAATAGA TATTTACTGT
  AGAACAAATT TTATAATAAC AGCTAAACAC TATTTTAAGA AAATTAACCA TCAGTAGGGA
  TCTGAATAGG TCGTCGGCTC TCATCCACCC AAGACAACGT GAAGAAGCAG TGAAGAACAC
  R
  CTTTTCTGAC CCTGGGAGGA CACACAAAGA AGGGAAATGT GTGTGAATGT TCTTGGTTAT
  TTAAAACATG AGTAGAAGCT AGATCCCTGC ACTTAGGAGA TAAAGGCAGG AGGATCAGGT
  GTCCAAGGTC ATCCTTGGCC ATACAGCCAG TTGGACCATG TGAGACCCTG TTCACCAAAG
  GAAAAATTGG GCTTGGGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148090893	ENSMUSSNP7091736	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46277648					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24503020 () rs orientation: forward

Symbol	Name	Function Class
Gm73689	predicted gene, 73689	within coordinates
Rr608272	regulatory region 608272	1856 bp proximal