rs46285507 SNP Detail

Summary

• ID
  rs46285507
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98944810 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCAAGTTTT GGCCTGCTGG TTCCAATGCT TTCAGGCTTG
  TGACAAGGAA GATCGTATTG TGGAAGGGCG TGAATCGGGA GAATGCTTAC CTAGCTCCTC
  K
  CCTCATGACA GCTGGAAGCA AACCAAGAGA GAGGAATGGT CCAGGGGCAA GATCTCCCCT
  CGGGATAAAA CTCCTGTGGC CACTTTCCCA AAAACCCTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148463822	ENSMUSSNP1685940	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325079693	CHEV_15_98877360	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46285507					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98944810 () rs orientation: forward

Symbol	Name	Function Class
D15Jcs28	DNA segment, Chr 15, John C. Schimenti 28	895 bp proximal
Gm41399	predicted gene, 41399	within coordinates
Rr311358	regulatory region 311358	160 bp proximal