rs46286023 SNP Detail

Summary

• ID
  rs46286023
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:32151258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGT CCCGGGCTTC GCCTCACCTT
  S
  GTGCATTCCT CACTCGGGCT CTCCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147947589	ENSMUSSNP7339	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss325136312	CHEV_16_32332526	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46286023					SNP	C	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:32151258 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8188	CpG island 8188	within coordinates
Gm59802	predicted gene, 59802	within coordinates
Rr404777	regulatory region 404777	126 bp downstream
Tssr137967	transcription start site region 137967	174 bp downstream
Ubxn7	UBX domain protein 7	within coordinates