rs46290252 SNP Detail

Summary

• ID
  rs46290252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145656958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAGGTTTAA ATTTGCTCTT
  TTATTAATAC AGGGACTCAA TGTGTAGCTC ATCACGGCCT CAAACTTCCT TTGTAGCACA
  GGTTGACCTC AAACTAGGAA TTCTCCTGCC TCAGCCTCTC AATGCTTAGT AAGCATCCTA
  GCTCAGTGCT GGGATTACAG CCACTGCATG TGGCTTAGGA AAATATTTTC CTGACTGTTT
  R
  GCTAAATAGA AAATCCAACC TACCTGAGAC CCTCAGCCTC AGCCTCAGCA CCCCCTTCAG
  CCCTGAACCC CCTCGGCTTG TTTAACTCTT CCAGGCCGGG AACATGGCTC CCTTTTCAGC
  ACCCTTTAAC CACACAATCA TGAAGTGCTC ATTCACTGAC AAGCCCTCTG GGTTTCTCTT
  CTCCTCAGTT CACTTAAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss136040885	ENSMUSSNP4842134	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss321009195	CHEV_3_145614167	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46290252					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145656958 () rs orientation: forward

Symbol	Name	Function Class
Rr586881	regulatory region 586881	249 bp distal
Rr586882	regulatory region 586882	77 bp proximal
Rr586883	regulatory region 586883	1459 bp proximal