rs46291252 SNP Detail

Summary

• ID
  rs46291252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:102475258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGACCATTTG TCTCAAATTC CTCATTTTAG CAGGCCTGGA
  AATGGGGCTT CAACCCAGTT TCTTGAAGCT GGCTGAACAG GTGGGTGCCA GCAGGATCAG
  R
  CTGGGGTGTC CTACGCCCAG TCCTCAACTG CATCACCTCT CCATGCTGTG ATACCCCAAG
  ATGTATGGCT GGCTGTGTCT CACTGGGGAC CAGCCCAAGC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	WSB/EiJ
ss52607040	NES15454551	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	WSB/EiJ
rs46291252					SNP	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52607040	NES15454551	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:102475258 () rs orientation: forward

Symbol	Name	Function Class
Rr265893	regulatory region 265893	1825 bp distal
Rr265894	regulatory region 265894	1144 bp proximal