rs46298132 SNP Detail

Summary

• ID
  rs46298132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84587109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A ATCCTGTGGC CGAGCATGAA GCAGAAGGCA CAGCAGCCAG
  CGGCACGAGC ATCCGCAGAC ACTCAGTCTC CGAGATGACA TCTTGTCCGG AGCCCCAGGG
  Y
  TTTGTGGACA CGCCTGGCCA GGGCCCTTCG GGGACCTTCC GGTCTTCTCC AACACCCCAC
  TCAGGGCCTT GCCCCAGCAG ACTATACCCC CCTGCCCATT C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148254573	ENSMUSSNP4059229	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46298132					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84587109 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	within coordinates
Rr304869	regulatory region 304869	1909 bp distal
Rr304870	regulatory region 304870	509 bp distal
Rr304871	regulatory region 304871	692 bp proximal
Rr314877	regulatory region 314877	310 bp distal
Rr404546	regulatory region 404546	567 bp downstream