rs46298999 SNP Detail

Summary

• ID
  rs46298999
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68258199 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGGCACA GCATTTGAAC
  ACACATATTC AAGACTATTA TTATTACCCA ACTGAAAAAT AACATTGACA TAGACTCAAA
  GAAAATTTAA ATATATTGTT ACAGAATTTG GTTGTAAAAT GCTGGAACAA GTTTTAAAGG
  AGTCAGACAC CTGACAAATA GCTGAGGGCT TTATGAGGAA GGGTGTGGTG AGGAGAATAC
  A
  GTTTCCTCTA TACACAGCTT CAAGCTCAGC TTCTCCACTA CTGAGGTAAA TCATATCACC
  ACTGAGAGTC TCCAGGTTCA TATCTCTTTG ATGACATTAA TGATCAAATA GAGTAAATGA
  TGTGATTGAA CTCTGTTTGA AAAATAATAT GAAAAATCCA CTATTATCAA GAATGGCAAA
  AAAATAGAGT AGTGGAACGT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146487456	ENSMUSSNP288872	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46298999					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68258199 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	1108 bp upstream