rs46309281 SNP Detail

Summary

• ID
  rs46309281
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45027391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTGAAAGA AGCTAGGTTT
  GGGATTGTAC CCCTTTAATC TCATACTTTG GAGCAGAGGC AGCCTGGCCC ACAGTGAGCT
  TCAGGTCAGC CACTACGTGG TGAGACGAAA CAAAACAAAC CCAGAAGTTG GAACACCTGC
  CACACCTAGA TTCCCAGGGT ACACTACATT TCCAGCCTTC TCAGCTGCCT CGTGCTCCCC
  M
  CCTTAGCCAT GTAACATTTA CCTTCTGAGG AGTGAGCTCA CCTTCCTTGT CTCTGTACCT
  TCTACTTCCC TGTCAGTCTC AAAGCACCAA CTCAGACCCT GCCCTGCTCA TCACACTATA
  GCACGCTCCA ACGAACTGTT AGAGGCCATC AGTACCTCCC CAACTGTTCA AAGAAAGCAC
  TACCACACCT CCCCAGATTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss149134236	ENSMUSSNP3706119	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46309281					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45027391 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	within coordinates
Tssr66520	transcription start site region 66520	770 bp downstream