rs46312066 SNP Detail

Summary

• ID
  rs46312066
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:27955744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATC AGCCTTTGTC CAAACAGATT
  M
  ATTTCCTATT CTGCGAATGT AAACA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323281680	CHEV_10_27799554	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46312066					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:27955744 () rs orientation: forward

Symbol	Name	Function Class
Ptprk	protein tyrosine phosphatase receptor type K	within coordinates
Rr214336	regulatory region 214336	1144 bp distal
Rr219035	regulatory region 219035	1857 bp proximal
Rr222425	regulatory region 222425	512 bp proximal
Rr224630	regulatory region 224630	1743 bp distal