rs46313026 SNP Detail

Summary

• ID
  rs46313026
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45355113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG GGTGGCCCGG CTGGGGCCCC
  Y
  CCTGGCGGGG GAGCGCTGCT TGGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss149142269	ENSMUSSNP477953	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46313026					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45355113 () rs orientation: forward

Symbol	Name	Function Class
Car11	carbonic anhydrase 11	1007 bp downstream
Cpgi19081	CpG island 19081	21 bp distal
Cpgi19082	CpG island 19082	811 bp proximal
Dbp	D site albumin promoter binding protein	within coordinates
Rr400318	regulatory region 400318	674 bp downstream
Tssr66612	transcription start site region 66612	397 bp downstream
Tssr66613	transcription start site region 66613	382 bp downstream
Tssr66614	transcription start site region 66614	340 bp downstream
Tssr66615	transcription start site region 66615	297 bp downstream
Tssr66616	transcription start site region 66616	266 bp downstream
Tssr66617	transcription start site region 66617	236 bp downstream
Tssr66618	transcription start site region 66618	157 bp downstream
Tssr66619	transcription start site region 66619	502 bp upstream
Tssr66620	transcription start site region 66620	541 bp upstream
Tssr66621	transcription start site region 66621	1439 bp upstream
Tssr72444	transcription start site region 72444	1216 bp downstream