rs46325045 SNP Detail

Summary

• ID
  rs46325045
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12329405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCGTTTTG CAGGAGGGGT
  GAGGGAGCCT GATAGGGTTC TGGCCCTGAC AGAGGAGCTT ATGGGATGAA CACTGGAAAA
  TGTACTGCCG CTGTGTGCTG AGGAGAAAGG TCTGAAGAGC AAGTGGTAGG GGCCAGAGGC
  AAGGGATGCT ACAGCCAGGC AGTACTCCAG CCTGGATCCC AACAACCTAG GCAGGGAATT
  R
  TGAAGAGAGA CTGTCTAGTA TGGCTGTCCT CTCCTGGTGC AATGAGTGAA GAAGCAGTCT
  CCCAGGGAGA CTGAGGCAGG ACCATGTGGA AGTTGTCACC CAGGGCCAGT GGCCTGGTTT
  CTGTAGTGAT AAAAGGAAGC TATGAGAGGT AGTGAAAGGA GAGTAGCGGG AGGCAGAGAG
  AGGGTGGGGC TGCAGGCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss60572172	NES16031366	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs46325045					SNP	A	A	A	A	G	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60572172	NES16031366	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12329405 () rs orientation: forward

Symbol	Name	Function Class
A230072I06Rik	RIKEN cDNA A230072I06 gene	within coordinates
Rr659697	regulatory region 659697	216 bp distal