rs46326128 SNP Detail

Summary

• ID
  rs46326128
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:157123130 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTA CCTGTTAACA TATGAGCTCC
  W
  ATCCTGTCTT TGTATCTAGT TTTCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148095686	ENSMUSSNP146908	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss320585279	CHEV_2_157106946	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46326128					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:157123130 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12571	CpG island 12571	1371 bp distal
Mroh8	maestro heat-like repeat family member 8	1661 bp upstream
Rpn2	ribophorin II	within coordinates
Rr568460	regulatory region 568460	1262 bp distal
Tssr21231	transcription start site region 21231	1893 bp downstream
Tssr27165	transcription start site region 27165	1692 bp upstream
Tssr27166	transcription start site region 27166	1655 bp upstream
Tssr27167	transcription start site region 27167	1632 bp upstream