rs46327450 SNP Detail

Summary

• ID
  rs46327450
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147783077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTGTTATGC ACTTTATTCT ATATGGCTGG CCAGCACTTA
  GTCACTCAGG AGTGTCTTAT GCCTGGGAAC ATATGCGTAT GTCATGCTCT TGGCCTTTGC
  W
  GAGGCTTTGA GGACCAAACT CAGGTCCTTG GGCTTGCTGG GCCCACAGTT TAGCAACTGA
  TCATCTCCCA AAGCTTTTCA ATAATAATGA GAATGATGA                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147906857	ENSMUSSNP1282918	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46327450					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147783077 () rs orientation: forward

Symbol	Name	Function Class
Rr566828	regulatory region 566828	1384 bp proximal